| Protein: | NFYA2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 295 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NFYA2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
396.0 | [0..1] | [295..1] |
|
|
199.0 | [0..22] | [218..17] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MAMQTVREGL FSAPQTSWWT AFGSQPLAPE SLAGDSDSFA GVKVGSVGET GQRVDKQSNS 60
61 ATHLAFSLGD VKSPRLVPKP HGATFSMQSP CLELGFSQPP IYTKYPYGEQ QYYGVVSAYG 120
121 SQSRVMLPLN M
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.398 | b.60.1 | Lipocalins |
| View | Download | 0.354 | b.60.1 | Lipocalins |
| View | Download | 0.335 | d.131.1 | DNA clamp |
| View | Download | 0.330 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.330 | b.60.1 | Lipocalins |
| View | Download | 0.325 | b.1.12 | Purple acid phosphatase, N-terminal domain |
| View | Download | 0.255 | d.227.1 | OsmC-like |
| View | Download | 0.252 | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.244 | d.77.1 | Ribosomal protein L5 |
| View | Download | 0.230 | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.218 | c.53.2 | beta-carbonic anhydrase, cab |
| View | Download | 0.213 | b.29.1 | Concanavalin A-like lectins/glucanases |
|
Region A: Residues: [132-218] |
1 11 21 31 41 51
| | | | | |
1 ETEDSTIYVN SKQYHGIIRR RQSRAKAAAV LDQKKLSSRC RKPYMHHSRH LHALRRPRGS 60
61 GGRFLNTKSQ NLENSGTNAK KGDGSMQ
|
| Detection Method: | |
| Confidence: | 30.60206 |
| Match: | PF02045.6 |
| Description: | No description for PF02045.6 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.684 | N/A | N/A | a.48.4 | Description not found. |
| View | Download | 0.654 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.651 | N/A | N/A | a.2.18 | Description not found. |
| View | Download | 0.628 | N/A | N/A | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.617 | N/A | N/A | a.2.15 | Description not found. |
| View | Download | 0.595 | N/A | N/A | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.560 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.474 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.465 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.453 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.348 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.276 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.258 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
|
Region A: Residues: [219-295] |
1 11 21 31 41 51
| | | | | |
1 IQSQPKPQQS NSQNSEVVHP ENGTMNLSNG LNVSGSEVTS MNYFLSSPVH SLGGMVMPSK 60
61 WIAAAAAMDN GCCNFKT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.313 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.313 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.270 | a.4.1 | Homeodomain-like |
| View | Download | 0.232 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.222 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.201 | b.85.6 | Molybdenum cofactor biosynthesis protein MoeA, C-terminal domain |
