YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PAP11_ARATH
Organism: Arabidopsis thaliana
Length: 212 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAP11_ARATH.

Description E-value Query
Range
Subject
Range
gi|50927801, gi|... - gi|50927801|ref|XP_473431.1| OSJNBa0010H02.5 [Oryza sativa (japonica cultivar-group)], gi|38345467|e...
204.0 [0..10] [207..11]

Back

Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALALSLSAC SPPLRRTRRA GFRTSCSIFA NPAQRAKRKL LELISEEDRG LRTQKDPKKR  60
   61 DEIVNAIESM TVIGRSSITT DDSLSATWRL LWTTEKEQLF IIEKAGLFGT TAGDVLQVID 120
  121 VNKRILNNVI TFPPDGVFFV RSDIDIASPQ RVNFRFNSAV LRGKNWELPL PPFGKGWFEN 180
  181 VYMDGEIRVA KDIRGDYLIV DRAPYNWTES FV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 69.79588
Match: PF04755.3
Description: No description for PF04755.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle