| Protein: | PME60_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 540 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME60_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
535.0 | [0..6] | [540..14] |
|
Region A: Residues: [1-192] |
1 11 21 31 41 51
| | | | | |
1 MNIMMVQNIS FLSLHLLLIL LLCLRPLTTV ADGNSTNIDG WCDKTPYPYP CKRYFIKHSG 60
61 FRLPTQISEF RVLLVEAAMD RAVSAWDKLT NSSKNCTDFK KQAVLADCIN LYGDTVMQLN 120
121 RTLQGVSSKT GRRCTDFDAQ TWLSTALTNT ETCRRGSSDL NVSDFTTPIV SNTKISHLIS 180
181 NCLAVNGALL TA
|
| Detection Method: |  |
| Confidence: | 23.0 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [193-540] |
1 11 21 31 41 51
| | | | | |
1 GKNDSTTGDS KGFPTWVSRK ERRLLQLQSV RANLVVAKDG SGHFKTVQAA IDVAGRRKVT 60
61 SGRFVIYVKR GIYQENLNVR LNNDNIMLVG DGMRYTIITG GRSVKGGYTT YSSATAGIEG 120
121 LHFIAKGIAF QNTAGPAKGQ AVALRSSSDL SIFYRCSIEG YQDTLMVHSQ RQFYRECYIY 180
181 GTVDFIFGNA AVVFQNCIIL PRLPLKGQAN VITAQGRTDL FQNTGISIHN SIIIPAPDLK 240
241 PVVRSVKTYM GRPWMMYSRT VVLKTYIDSV VSPVGWSPWT KGSTYGLDTL FYAEYKNIGP 300
301 ASSTRWRVRW KGFHVLSKAS DASAFSVGKF IAGTAWLPGS GIPFTSEL
|
| Detection Method: | |
| Confidence: | 106.0 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142826098671881 | bayes_pls_golite062009 |
