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View Structure Prediction Details

Protein: gi|18377712, gi|...
Organism: Arabidopsis thaliana
Length: 415 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18377712, gi|....

Description E-value Query
Range
Subject
Range
gi|62318721 - gi|62318721|dbj|BAD93738.1| hypothetical protein [Arabidopsis thaliana]
624.0 [0..1] [415..1]

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Predicted Domain #1
Region A:
Residues: [1-221]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMTRELYRI LGTKYAPLLI RRFSLWSTKK DPDLESALSR NKRWIVNSRL KNIILRCPNQ  60
   61 VASIKFLQKK FKTLDLQGKA LNWLKKYPCC FHVYLENDEY YCRLTKPMMT LVEEEELVKD 120
  121 TQEPVLADRL AKLLMLSVNQ RLNVVKLNEF KRSFGFPDDY VIRIVPKYSD VFRLVNYSGR 180
  181 KSSMEIELLL WKPELAVSAV EAAAKKCGSE PSFSCSLPST W

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [222-415]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKPWERFMEF NAFPYISPYE DHGDLVEGSK ESEKRSVGLV HELLSLTLWK KLSIVKLSHF  60
   61 KREFGLPEKL NGMLLKHPGI FYVGNKYQVH TVILREGYNG SELIHKDPLV VVKDKFGELM 120
  121 QQGLYEYNHR RYLANLEKKR EKGIESLKPV VRKKDRNHDR DDVDEEENHG DRPGGLFDPE 180
  181 ERKRFYQILF SDTQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle