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View Structure Prediction Details

Protein: gi|7433186, gi|4...
Organism: Arabidopsis thaliana
Length: 353 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7433186, gi|4....

Description E-value Query
Range
Subject
Range
gi|27124556 - gi|27124556|emb|CAC83626.1| gibberellin 20-oxidase [Cucurbita maxima]
358.0 [0..13] [351..15]

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Predicted Domain #1
Region A:
Residues: [1-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGKGVTFSS VIVPSVQEMV KEKVITTVLP PRYVRSDQEK GEAAIDSGEN QIPIIDMSLL  60
   61 SSSTSMDSEI DKLDFACKEW GFFQLVNHGM DLDKFKSDIQ DFFNLPMEEK KKLWQQPGDI 120
  121 EGFGQAFVFS EEQKLDWADV FFLTMQPVPL RKPHLFPKLP LPFRDTLDTY SAELKSIAKV 180
  181 LFAKLASALK IKPEEMEKLF DDELGQRIRM NYYPPCPEPD KAIGLTPHSD ATGLTILLQV 240
  241 NEVEGLQIKK DGKWVSVKPL PNALVVNVGD ILEIITNGTY RSIEHRGVVN SEKERLSVAS 300
  301 FHNTGFGKEI GPMRSLVERH KGALFKTLTT EEYFHGLFSR ELDGKAYLDV MRI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.221849
Match: 2brtA
Description: No description for 2brtA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.391261742890951 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle