YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: 3AT1_ARATH
Organism: Arabidopsis thaliana
Length: 469 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for 3AT1_ARATH.

Description E-value Query
Range
Subject
Range
gi|75907835, gi|... - gi|75907835|ref|YP_322131.1| non-ribosomal peptide synthase [Anabaena variabilis ATCC 29413], gi|757...
347.0 [0..17] [469..1149]

Back

Predicted Domain #1
Region A:
Residues: [1-469]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAHLQPPKI IETCHISPPK GTVPSTTLPL TFFDAPWLSL PLADSLFFFS YQNSTESFLQ  60
   61 DFVPNLKHSL SITLQHFFPY AGKLIIPPRP DPPYLHYNDG QDSLVFTVAE STETDFDQLK 120
  121 SDSPKDISVL HGVLPKLPPP HVSPEGIQMR PIMAMQVTIF PGAGICIGNS ATHVVADGVT 180
  181 FSHFMKYWMS LTKSSGKDPA TVLLPSLPIH SCRNMIKDPG EVGAGHLERF WSQNSAKHSS 240
  241 HVTPENMVRA TFTLSRKQID NLKSWVTEQS ENQSPVSTFV VTLAFIWVSL IKTLVQDSET 300
  301 KANEEDKDEV FHLMINVDCR NRLKYTQPIP QTYFGNCMAP GIVSVKKHDL LGEKCVLAAS 360
  361 DAITARIKDM LSSDLLKTAP RWGQGVRKWV MSHYPTSIAG APKLGLYDMD FGLGKPCKME 420
  421 IVHIETGGSI AFSESRDGSN GVEIGIALEK KKMDVFDSIL QQGIKKFAT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.0
Match: 2e1tA
Description: No description for 2e1tA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle