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View Structure Prediction Details

Protein: SPR1_ARATH
Organism: Arabidopsis thaliana
Length: 119 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|25518436, gi|... - gi|9797761|gb|AAF98579.1|AC013427_22 Contains similarity to PIR7A protein from Oryza sativa gb|Z3427...
168.0 [0..1] [118..379]
gi|4680212 - gi|4680212|gb|AAD27575.1|AF114171_17 hypothetical protein [Sorghum bicolor]
121.0 [0..5] [118..100]
SP1L4_ORYSJ - Protein SPIRAL1-like 4 OS=Oryza sativa subsp. japonica GN=Os04g0578300 PE=3 SV=1
116.0 [0..14] [116..17]
gi|125549435, gi... - gi|125549435|gb|EAY95257.1| hypothetical protein OsI_17080 [Oryza sativa Indica Group], gi|116309686...
114.0 [0..14] [116..17]
gi|106879585 - gi|106879585|emb|CAJ38376.1| putative nitrilase-associated protein [Plantago major]
110.0 [0..1] [118..25]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRGNSCGGG QSSLDYLFGG DAPAPKPVPA PRPAPTESNN GPAPPVTAVT ATALTTATTS  60
   61 VEPAELNKQI PAGIKTPVNN YARAEGQNTG NFLTDRPSTK VHAAPGGGSS LDYLFTGGK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.319 a.40.1 Calponin-homology domain, CH-domain
View Download 0.319 a.40.1 Calponin-homology domain, CH-domain
View Download 0.283 a.24.26 Description not found.
View Download 0.273 b.1.18 E set domains
View Download 0.269 b.55.1 PH domain-like
View Download 0.256 c.57.1 Molybdenum cofactor biosynthesis proteins
View Download 0.237 c.61.1 PRTase-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle