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View Structure Prediction Details

Protein: AGAL1_ARATH
Organism: Arabidopsis thaliana
Length: 410 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGAL1_ARATH.

Description E-value Query
Range
Subject
Range
gi|30725668, gi|... - gi|30725668|gb|AAP37856.1| At5g08380 [Arabidopsis thaliana], gi|20260602|gb|AAM13199.1| alpha-galact...
508.0 [0..1] [410..1]

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Predicted Domain #1
Region A:
Residues: [1-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRAMVIKM PILMILISSM VMTMVESSRS VNNGHDDSEI LRRHLLTNGL GVTPPMGWNS  60
   61 WNHFSCNIDE KMIKETADAL VTTGLSKLGY NYVNIDDCWA EISRDSKGSL VPKKSTFPSG 120
  121 IKAVADYVHS KGLKLGIYSD AGYFTCSKTM PGSLGYEEHD AKTFAEWGID YLKYDNCNSD 180
  181 GSKPTVRYPV MTRALMKSGR PIFHSLCEWG DMHPALWGSP VGNSWRTTND IKDTWLSMIS 240
  241 IADMNEVYAE HARPGGWNDP DMLEVGNGGM TKDEYIVHFS IWAISKAPLL LGCDIRNMTK 300
  301 ETMEIVANKE VIAINQDPHG VQAKKVRMEG DLEVWAGPLS GYRVALLLLN RGPSRTSITA 360
  361 LWEDIEIPAN SIVEARDLWE HQTLKQKFVG NLTATVDSHA CKLYVLKPVA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 132.0
Match: 1uasA
Description: Melibiase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, hydrolyzing O-glycosyl compounds 4.55801959095491 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 4.29108420555514 bayes_pls_golite062009
hydrolase activity 2.72831542916949 bayes_pls_golite062009
chitinase activity 2.45357334610104 bayes_pls_golite062009
alpha-amylase activity 2.09193270404736 bayes_pls_golite062009
amylase activity 2.03484942782894 bayes_pls_golite062009
glucosidase activity 1.92306554001182 bayes_pls_golite062009
catalytic activity 1.85569074294201 bayes_pls_golite062009
trehalase activity 1.2370446297175 bayes_pls_golite062009
hexosaminidase activity 0.763360027922833 bayes_pls_golite062009
alpha-glucosidase activity 0.502835520523619 bayes_pls_golite062009
carbohydrate binding 0.4998423581103 bayes_pls_golite062009
maltase activity 0.442635030512661 bayes_pls_golite062009
alpha-1,3-glucan synthase activity 0.434118980237671 bayes_pls_golite062009
beta-N-acetylhexosaminidase activity 0.369121784919131 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 0.266938437560648 bayes_pls_golite062009
binding 0.207604764313869 bayes_pls_golite062009
hyalurononglucosaminidase activity 0.106703520931481 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle