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View Structure Prediction Details

Protein: gi|6714390, gi|1...
Organism: Arabidopsis thaliana
Length: 410 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6714390, gi|1....

Description E-value Query
Range
Subject
Range
gi|25405713, gi|... - gi|4585974|gb|AAD25610.1|AC005287_12 Hypothetical protein [Arabidopsis thaliana], pir||E96584 hypoth...
504.0 [0..22] [398..4]

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Predicted Domain #1
Region A:
Residues: [1-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMKRSREES QGGGNHNRFV DEGPRLNLPL TKTPELINKI ESYLKVHYTC PHQQTENSSK  60
   61 TSTLPKSPEK LKAMNFPIST IKIGDCVFVA KNPDDIVAKF YFAKKKLLWE FLFGEPVANM 120
  121 PRLKSKIEIQ WNDVSSFEES INSRDETGIL KIELKKRPTF FTETNPQAGK HTQWKQLDYD 180
  181 FTGDQASYYR RHTLHFPPGV LQKNLEKLLT DSFWSKLYKV PFPVHESLYF DIGFENNNSS 240
  241 NGHSKTVGFN VNNGLQHDFS QVRDLKER

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [269-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKIITLIGIG GVGEGEGNFS MANGGWQRNS YSHVNSLNYN TDNGLLGMQA IPPSSQVANE  60
   61 HYNNTQNDYT GSQFGYRMNQ DEIQKMQRIG KILESQAYAV PDTQTKLTSS GMNNGPMYPP 120
  121 AGSYLESRLL EEWYEHTRRF QQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle