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View Structure Prediction Details

Protein: CAF1H_ARATH
Organism: Arabidopsis thaliana
Length: 239 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAF1H_ARATH.

Description E-value Query
Range
Subject
Range
gi|108874497, gi... - gi|157123094|ref|XP_001660004.1| ccr4-associated factor [Aedes aegypti], gi|108874497|gb|EAT38722.1|...
333.0 [0..2] [231..49]

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Predicted Domain #1
Region A:
Residues: [1-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLIEDCLRS YRFIAIDTEF PSTLRETTQH ATDEERYMDM SFSVDRAKLI QLGLTLFDIN  60
   61 GRIGGTWEIN FSDFGVDDAR NEKSIEFLRR NGLDLRKIRE EGIRIEGFFS EMFWMLKKTR 120
  121 RNITWVTFHG SYDIAYLLKG FTGEALPVTS ERFSKAVARV LGSVYDLKVM AGRCEGLSSR 180
  181 LGLETLAHEF GLNRVGTAHH AGSNNELTAM VFAKVLSPFP LFLRFGSLEL RTIESEAIV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 89.30103
Match: 2p51A
Description: No description for 2p51A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle