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View Structure Prediction Details

Protein: gi|14326473, gi|...
Organism: Arabidopsis thaliana
Length: 384 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|14326473, gi|....

Description E-value Query
Range
Subject
Range
gi|186684841, gi... - gi|23125522|ref|ZP_00107451.1| COG0667: Predicted oxidoreductases (related to aryl-alcohol dehydroge...
330.0 [0..46] [384..1]

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Predicted Domain #1
Region A:
Residues: [1-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVSVHSVIA TNLATTLSSN YRNVSRRRTI STSVNCSVEI TEADRSVKLK NGNDSLEICR  60
   61 VLNGMWQTSG GWGKIDRNDA VDSMLRYADA GLSTFDMADH YGPAEDLYGI FINRVRRERP 120
  121 PEYLEKIKGL TKWVPPPIKM TSSYVRQNID ISRKRMDVAA LDMLQFHWWD YANDGYLDAL 180
  181 KHLTDLKEEG KIKTVALTNF DTERLQKILE NGIPVVSNQV QHSIVDMRPQ QRMAQLCELT 240
  241 GVKLITYGTV MGGLLSEKFL DTNLTIPFAG PRLNTPSLQK YKRMVDAWGG WNLFQGLLRT 300
  301 MKTISTKHGV SIPTVAVRYV LDQQGVGGSM IGVRLGLAEH IQDANAIFSL VLDEEDVNSI 360
  361 QEVTKKGKDL LQVIGDCGDE YRRI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.69897
Match: 1zsxA
Description: Crystal Structure Of Human Potassium Channel Kv Beta-subunit (KCNAB2)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle