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View Structure Prediction Details

Protein: gi|25411506, gi|...
Organism: Arabidopsis thaliana
Length: 223 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25411506, gi|....

Description E-value Query
Range
Subject
Range
gi|10281024 - gi|10281024|dbj|BAB13753.1| type II DNA topoisomerase [Candida parapsilosis]
240.0 [0..4] [223..484]

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Predicted Domain #1
Region A:
Residues: [1-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWALVAQAER LGSMRCRASR MPRGREWPRV RVPRDGLKSS FITVLVTPYV KVSRLTFSSH  60
   61 KYFIVLTNLS YVTSTLNTRN GKMKDRNYLN RWTIKFYKGV WVQVMREKNV LSNVDQNKRF 120
  121 FIWDEGSEAA LENAFGTSED KQKKWIEKYV PGTFLDSKKQ QIMYSDFVTK KLKLYFTTSN 180
  181 QRKHININKK NYILKKNDKK SKKIILKKYE KKVIQYIIIV LLI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.0
Match: 1bgwA
Description: TOPOISOMERASE RESIDUES 410-1202,
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle