Protein: | LEP_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 211 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LEP_ARATH.
Description | E-value | Query Range |
Subject Range |
|
189.0 | [0..3] | [163..34] |
Region A: Residues: [1-81] |
1 11 21 31 41 51 | | | | | | 1 MNTTSSKSKK KQDDQVGTRF LGVRRRPWGR YAAEIRDPTT KERHWLGTFD TAEEAALAYD 60 61 RAARSMRGTR ARTNFVYSDM P |
Detection Method: | |
Confidence: | 23.69897 |
Match: | 2gccA |
Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.339357445627225 | bayes_pls_golite062009 |
Region A: Residues: [82-211] |
1 11 21 31 41 51 | | | | | | 1 PSSSVTSIVS PDDPPPPPPP PAPPSNDPVD YMMMFNQYSS TDSPMLQPHC DQVDSYMFGG 60 61 SQSSNSYCYS NDSSNELPPL PSDLSNSCYS QPQWTWTGDD YSSEYVHSPM FSRMPPVSDS 120 121 FPQGFNYFGS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.