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View Structure Prediction Details

Protein: KCS2_ARATH
Organism: Arabidopsis thaliana
Length: 528 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KCS2_ARATH.

Description E-value Query
Range
Subject
Range
gi|18377979 - gi|18377979|gb|AAL67132.1| putative beta-ketoacyl-CoA synthase [Arabidopsis thaliana]
516.0 [0..6] [528..1]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS  60
   61 SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT RP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-528]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRIFLLDFAC YKPDSSLICT RETFMDRSQR VGIFTEDNLA FQQKILERSG LGQKTYFPEA  60
   61 LLRVPPNPCM SEARKEAETV MFGAIDAVLE KTGVNPKDIG ILVVNCSLFN PTPSLSAMIV 120
  121 NKYKLRGNVL SYNLGGMGCS AGLISIDLAK QLLQVQPNSY ALVVSTENIT LNWYLGNDRS 180
  181 MLLSNCIFRM GGAAVLLSNR SSDRCRSKYQ LIHTVRTHKG SDDNAFNCVY QREDNDDNKQ 240
  241 IGVSLSKNLM AIAGEALKTN ITTLGPLVLP MSEQLLFFAT LVARKVFNVK KIKPYIPDFK 300
  301 LAFEHFCIHA GGRAVLDEIE KNLDLSEWHM EPSRMTLNRF GNTSSSSLWY ELAYSEAKGR 360
  361 IKRGDRTWQI AFGSGFKCNS AVWRALRTID PSKEKKKKTN PWIDEIHEFP VPVPRTSPVT 420
  421 SSSESR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.522879
Match: 1bi5A
Description: Chalcone synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.61499311836466 bayes_pls_golite062009
transferase activity 1.02674433736465 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.95018443969363 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 0.71137845857094 bayes_pls_golite062009
acyltransferase activity 0.57223728364314 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle