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View Structure Prediction Details

Protein: gi|25370793, gi|...
Organism: Arabidopsis thaliana
Length: 136 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25370793, gi|....

Description E-value Query
Range
Subject
Range
gi|79567846, gi|... - gi|79567846|ref|NP_181139.2| EDA12 (embryo sac development arrest 12) [Arabidopsis thaliana], gi|264...
218.0 [0..1] [133..14]

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Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFRSRSHLF LNEFETSAGR FNLLSRNHRD HLYVSDVVDT LSEQFSSMSL LHPKPRLVPT  60
   61 LPSSLQSQQD RAKVLQRQEA RLQKRGLVHR NGNVLKESVG TGVFHPLQRP TFKTFDPVKK 120
  121 HSKLLHLSSS KTFFYV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.223 a.1.1 Globin-like
View Download 0.217 a.1.1 Globin-like
View Download 0.210 a.95.1 Influenza virus matrix protein M1
View Download 0.210 a.95.1 Influenza virus matrix protein M1
View Download 0.201 a.29.6 Description not found.


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