| Protein: | SGT1A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 350 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SGT1A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
242.0 | [0..12] | [348..177] |
|
|
234.0 | [0..1] | [311..88] |
|
|
233.0 | [0..2] | [310..290] |
|
|
232.0 | [0..1] | [311..88] |
|
|
231.0 | [0..1] | [349..1] |
|
|
229.0 | [0..1] | [311..225] |
|
Region A: Residues: [1-287] |
1 11 21 31 41 51
| | | | | |
1 MAKELADKAK EAFVDDDFDV AVDLYSKAID LDPNCAEFFA DRAQAYIKLE SFTEAVADAN 60
61 KAIELDPSLT KAYLRKGTAC MKLEEYRTAK TALEKGASIT PSESKFKKLI DECNFLITEE 120
121 EKDLVQPVPS TLPSSVTAPP VSELDVTPTA KYRHEYYQKP EEVVVTVFAK GIPKQNVNID 180
181 FGEQILSVVI EVPGEDAYYL QPRLFGKIIP DKCKYEVLST KIEICLAKAD IITWASLEHG 240
241 KGPAVLPKPN VSSEVSQRPA YPSSKKVKDW DKLEAEVKKQ EKDEKLE
|
| Detection Method: |  |
| Confidence: | 50.522879 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [288-350] |
1 11 21 31 41 51
| | | | | |
1 GDAALNKFFR EIYQNADEDM RRAMSKSFVE SNGTVLSTNW QEVGTKTIES TPPDGMELKK 60
61 WEI
|
| Detection Method: | |
| Confidence: | 21.468521 |
| Match: | PF05002.6 |
| Description: | No description for PF05002.6 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.702 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.637 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.637 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.574 | N/A | N/A | a.5.2 | UBA-like |
| View | Download | 0.549 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.547 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.525 | N/A | N/A | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.525 | N/A | N/A | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.456 | N/A | N/A | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.433 | N/A | N/A | a.5.2 | UBA-like |
| View | Download | 0.274 | N/A | N/A | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.253 | N/A | N/A | a.153.1 | Nuclear receptor coactivator interlocking domain |
