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View Structure Prediction Details

Protein: U496P_ARATH, U49...
Organism: Arabidopsis thaliana
Length: 385 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for U496P_ARATH, U49....

Description E-value Query
Range
Subject
Range
U496H_ARATH - UPF0496 protein At5g66675 OS=Arabidopsis thaliana GN=At5g66675 PE=2 SV=1
378.0 [0..5] [381..32]
U496A_ORYSJ - UPF0496 protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0199100 PE=2 SV=1
U496A_ORYSI - UPF0496 protein 1 OS=Oryza sativa subsp. indica GN=OsI_010151 PE=2 SV=1
319.0 [0..18] [381..35]

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Predicted Domain #1
Region A:
Residues: [1-70]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLSKENMLK YSAHLRAYNS ACGDHPELKS FDSELQQKTS NLINSFTSDA KTGLVPLPQH  60
   61 AAYKEFTKHL 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [71-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AEVNQQVSDY IIGYGEVVWE NSTLRSLVET YFESAKKTLD IAENVTEYVD EAKRGERYIV  60
   61 AAVAQFEKDK ENDVGKKTKR YENTLRELKK FEAMGNPFDG DKFTTLFKLM HKEQESLLER 120
  121 VRETKEKLDE ELKNIEMEIS SRKKWSIISN VLFIGAFVAV AVGSMVLVCT GVGAGVGVAG 180
  181 LLSLPLIAIG WVGVHTILE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [270-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKIQAREKQE EALKKAHRIA NEMDKGMETD KVDMNSISGK VHALKSKITS MLNAVKDATE  60
   61 DGANEVDTKQ VMETLTGDVV ELTEDIKAVG DDVAKYSKMI EETSYHVLQK ITGSGK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.984 N/A N/A a.29.16 Description not found.


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