| Protein: | ALIS3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 349 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALIS3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
497.0 | [0..1] | [348..1] |
|
|
470.0 | [0..20] | [349..27] |
|
|
467.0 | [0..1] | [333..1] |
|
|
464.0 | [0..2] | [348..6] |
|
|
462.0 | [0..2] | [348..4] |
|
|
461.0 | [0..1] | [333..1] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MSSNTASSSA GAAGSGDSSA ARKNSKRPKY SKFTQQELPA CKPILTPGWV ISTFLIVSVI 60
61 FIPLGVISLF ASQDVVEIVD RYDTECIPAP ARTNKVAYIQ GDGDKVCNRD LKVTKRMKQP 120
121 IYVYYQLENF YQNHRRYVKS RSDSQLRSTK Y
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [152-209] |
1 11 21 31 41 51
| | | | | |
1 ENQISACKPE DDVGGQPIVP CGLIAWSLFN DTYALSRNNV SLAVNKKGIA WKSDKEHK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.370 | d.17.6 | Archaeosine tRNA-guanine transglycosylase, C2 domain |
| View | Download | 0.357 | g.59.1 | Zinc-binding domain of translation initiation factor 2 beta |
| View | Download | 0.357 | d.241.1 | Description not found. |
| View | Download | 0.323 | g.37.1 | C2H2 and C2HC zinc fingers |
| View | Download | 0.321 | g.37.1 | C2H2 and C2HC zinc fingers |
| View | Download | 0.294 | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.291 | b.1.2 | Fibronectin type III |
| View | Download | 0.246 | b.1.1 | Immunoglobulin |
| View | Download | 0.235 | g.18.1 | Complement control module/SCR domain |
|
Region A: Residues: [210-349] |
1 11 21 31 41 51
| | | | | |
1 FGNKVFPKNF QKGNITGGAT LDPRIPLSEQ EDLIVWMRTA ALPTFRKLYG KIESDLEMGD 60
61 TIHVKLNNNY NTYSFNGKKK LVLSTTSWLG GKNDFLGIAY LTVGGICFIL ALAFTIMYLV 120
121 KPRRLGDPSY LSWNRNPGGR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.793 | N/A | N/A | b.34.1 | C-terminal domain of transcriptional repressors |
| View | Download | 0.670 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.670 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.632 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.629 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.625 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.526 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.519 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.519 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.501 | N/A | N/A | d.131.1 | DNA clamp |
