| Protein: | SRS7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 345 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRS7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
538.0 | [0..1] | [345..1] |
|
|
347.0 | [0..1] | [344..1] |
|
|
271.0 | [0..117] | [344..131] |
|
|
242.0 | [0..111] | [335..67] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MAGLFYLGGR DHNKQDHHQE KDHNEDKSNN YLYLYKDEIY NNNKGFEIFP PQYFQQQQQQ 60
61 NHAAAPTNLY SFGMVPSGGN INNNRSTNRS LYFNVVSDHE PVR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.528 | a.29.10 | Description not found. |
| View | Download | 0.497 | a.29.12 | Description not found. |
| View | Download | 0.457 | a.7.12 | Description not found. |
| View | Download | 0.444 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.394 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.274 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.232 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.224 | d.14.1 | Ribosomal protein S5 domain 2-like |
|
Region A: Residues: [104-212] |
1 11 21 31 41 51
| | | | | |
1 SSTGGFTVTR QGNMNCQDCG NQAKKDCPHM RCRTCCKSRG FDCQTHVKST WVSAAKRRER 60
61 QAQLAVLPAK RIRDANSRGG GDDDDDDKED EKNDSCGGGS ALACTRVVN
|
| Detection Method: | |
| Confidence: | 0.999 |
| Match: | 1pyiA |
| Description: | PPR1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [213-345] |
1 11 21 31 41 51
| | | | | |
1 ASSSGLETSH LPPEISSPAV FRCMRVSSID DEDEEYAYQT AVSIGGHVFK GILYDQGPSS 60
61 DHHRYSSSLN GETSHQHHLN LMDSTPSAAT TNAVTAVNTN NGSIDPSSLY TAVATPFNAF 120
121 VAGGTPFFAS SRC
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.531 | b.60.1 | Lipocalins |
| View | Download | 0.368 | b.60.1 | Lipocalins |
| View | Download | 0.323 | b.60.1 | Lipocalins |
| View | Download | 0.323 | b.60.1 | Lipocalins |
| View | Download | 0.301 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.297 | b.60.1 | Lipocalins |
| View | Download | 0.297 | b.60.1 | Lipocalins |
| View | Download | 0.292 | b.60.1 | Lipocalins |
| View | Download | 0.292 | b.60.1 | Lipocalins |
| View | Download | 0.273 | d.54.1 | Enolase N-terminal domain-like |
