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View Structure Prediction Details

Protein: gi|4468805, gi|1...
Organism: Arabidopsis thaliana
Length: 603 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4468805, gi|1....

Description E-value Query
Range
Subject
Range
GH33_ARATH - Indole-3-acetic acid-amido synthetase GH3.3 OS=Arabidopsis thaliana GN=GH3.3 PE=1 SV=1
819.0 [0..1] [603..1]

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Predicted Domain #1
Region A:
Residues: [1-603]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVDSPLQSR MVSATTSEKD VKALKFIEEM TRNPDSVQEK VLGEILTRNS NTEYLKRFDL  60
   61 DGVVDRKTFK SKVPVVTYED LKPEIQRISN GDCSPILSSH PITEFLTSSG TSAGERKLMP 120
  121 TIEEDLDRRQ LLYSLLMPVM NLYVPGLDKG KGLYFLFVKS ESKTSGGLPA RPVLTSYYKS 180
  181 DHFKRRPYDP YNVYTSPNEA ILCSDSSQSM YAQMLCGLLM RHEVLRLGAV FASGLLRAIS 240
  241 FLQNNWKELA RDISTGTLSS RIFDPAIKNR MSKILTKPDQ ELAEFLVGVC SQENWEGIIT 300
  301 KIWPNTKYLD VIVTGAMAQY IPTLEYYSGG LPMACTMYAS SESYFGINLK PMCKPSEVSY 360
  361 TIMPNMAYFE FLPHNHDGDG AAEASLDETS LVELANVEVG KEYELVITTY AGLYRYRVGD 420
  421 ILRVTGFHNS APQFKFIRRK NVLLSVESDK TDEAELQKAV ENASRLFAEQ GTRVIEYTSY 480
  481 AETKTIPGHY VIYWELLGRD QSNALMSEEV MAKCCLEMEE SLNSVYRQSR VADKSIGPLE 540
  541 IRVVRNGTFE ELMDYAISRG ASINQYKVPR CVSFTPIMEL LDSRVVSAHF SPSLPHWSPE 600
  601 RRR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.957
Match: 1md9A
Description: Dihydroxybenzoate-AMP ligase DhbE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.927181813624701 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle