YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|14335096, gi|...
Organism: Arabidopsis thaliana
Length: 122 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|14335096, gi|....

Description E-value Query
Range
Subject
Range
DRM1_ARATH - Dormancy-associated protein 1 OS=Arabidopsis thaliana GN=DRM1 PE=1 SV=1
192.0 [0..1] [121..1]
gi|58700653 - gi|58700653|gb|AAC62104.2| auxin-repressed protein [Elaeagnus umbellata]
174.0 [0..1] [122..1]
gi|45738252 - gi|45738252|gb|AAS75891.1| auxin-repressed protein [Solanum virginianum]
gi|45738252 - gi|45738252|gb|AAS75891.1| auxin-repressed protein [Solanum virginianum]
174.0 [0..1] [121..1]
gi|45758711 - gi|45758711|gb|AAS76635.1| auxin-repressed protein [Nicotiana tabacum]
173.0 [0..1] [121..1]
gi|18266047 - gi|18266047|gb|AAL67436.1|AF458410_1 auxin-repressed protein [Brassica oleracea]
173.0 [0..7] [122..1]
gi|13430203 - gi|13430203|gb|AAK25768.1|AF336307_1 auxin-repressed protein like-protein [Malus x domestica]
170.0 [0..1] [121..1]
gi|28207599 - gi|28207599|gb|AAO32054.1| auxin-repressed protein [Brassica rapa subsp. pekinensis]
168.0 [0..9] [122..1]

Back

Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLLEKLWDD VVAGPQPDRG LGRLRKITTQ PINIRDIGEG SSSKVVMHRS LTMPAAVSPG  60
   61 TPTTPTTPTT PRKDNVWRSV FNPGSNLATR AIGSNIFDKP THPNSPSVYD WLYSGDSRSQ 120
  121 HR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 67.958607
Match: PF05564.3
Description: No description for PF05564.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.209 N/A N/A d.73.1 RuBisCO, small subunit


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle