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View Structure Prediction Details

Protein: gi|15238516, gi|...
Organism: Arabidopsis thaliana
Length: 652 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15238516, gi|....

Description E-value Query
Range
Subject
Range
YSL2_ARATH - Metal-nicotianamine transporter YSL2 OS=Arabidopsis thaliana GN=YSL2 PE=1 SV=1
601.0 [0..1] [652..1]

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Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENERVEREQ SQFQEDEFID SRKPPPWRKQ ITVRAIVASL LIGIVYSVIC LKLNLTTGLV  60
   61 PNLNISSALL AFVFLKSWTK VLQKAGIATT PFTRQENTIA QTCAVACYSI SLAGGFASYL 120
  121 LGLNRRTYEE 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [131-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TGVNTEGNNP RGIKEPGVGW MTSFLFVTSF IGLVVLVPLR KVMIIDYKLT YPSGTATAVL  60
   61 INGFHTSKGD KTAKKQIRGF IKSFGLSFFW AFFGWFYSGG EKCGFSQFPT FGLQALDKTM 120
  121 TYVGAGMICS HLVNLSLLFG AILSWGIMWP LIARLKGEWF PATLKDNSMQ GLNGYKVFIC 180
  181 IALILGDGLY NFVKILFFTG RSFHSRLSKT NSISTYSTKE 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [351-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDNLKRENEV FVRESIPLWM ACVGYLFFSL VSIIAIPLMF PQLKWYFVLV AYLLAPSLSF  60
   61 CNAYGAGLT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [420-507]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DMNMAYNYGK AALFVMAALA GKNDGVVAGM VACGLIKSIV SVSADLMHDF KTGHLTQTSP  60
   61 RSMLVAQAIG TAIGCVVAPL TFFLFYKA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [508-652]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FDVGNQNGEY KAPYAMIYRN MAIIGVQGPS ALPKHCLELC YGFFAFAVAA NLARDLLPDK  60
   61 PGKWIPLPMA MAVPFLVGGS FAIDMCIGSL VVYVWKKVNR KKADVMVPAV ASGLICGDGL 120
  121 WILPSSLLAL AKVRPPICMN FTAAH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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