| Protein: | gi|15242433, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 921 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15242433, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
528.0 | [0..88] | [921..2] |
|
Region A: Residues: [1-235] |
1 11 21 31 41 51
| | | | | |
1 MASSSHTRSY PLRLYEEGKS PLQKRSMAHS CYVSQIGKIK DGLGADVWDE LKKTTLGLFI 60
61 KFTESGFIWA AQTVHFFLTN QLRVDNIHEM WCLIDRRPIR FSLYEFENIT GLNCDMFDES 120
121 DTGETDYKDF WNEMGVSMSV GPLFTELERV FEISKTWSLE KRMMVGRLCL LSVGVHGIHH 180
181 GSRVPLSSAK RVLDPVAFEK YPWGRVAFDS LSRSVKIVKY DGDSYVIHGC VQTLL
|
| Detection Method: |  |
| Confidence: | 1.03 |
| Match: | 1q90B |
| Description: | Structure of the cytochrome b6f (plastohydroquinone : plastocyanin oxidoreductase) from Chlamydomonas reinhardtii |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.585723167263354 | bayes_pls_golite062009 |
|
Region A: Residues: [236-494] |
1 11 21 31 41 51
| | | | | |
1 VWIYESVPGI GEACGFRKTN LTGVPLLDWR SSRKRFNFTA FIEKEKAAHG QVRVRHMIPV 60
61 SEENMYPQWS DSAENHDTAL DNLLKDIIHN RLKSHAWTHV AARRKRKQNQ ESSNEDGESK 120
121 VIESTPADDV SHKKQRTGKA HIKVDEEEKT SLLDIWNMLE KMNVTISDMD KNASSRLVGL 180
181 EKKVACLEAS VKTRFEAVET DMRVLKESQP PVVSNEAATS NNNDEYEANS NQCSWIVEEK 240
241 PGSVDGLPIQ RVVKKTVNL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [495-598] |
1 11 21 31 41 51
| | | | | |
1 VKNKEAATKV LTKKKVAKYD KKKTIVNVEK VEKPKPEMKK TVVKVEKVDS PKPLQKKSVA 60
61 APTTKTFDDD VVDVTDKMAN KATADALRAL QEGLDNLDGI TSKR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [599-921] |
1 11 21 31 41 51
| | | | | |
1 RRVPQLAGSQ KYPYVGNSTV KRIITDVPSS SSVPEHLQPV SDDQFDRLKD WLEPDFEKEG 60
61 LNTNNFNARF YWQIMTPRND WPTERYGWLK DYHMGAAMSL FRRRFNRDPS KYPNQRIAFL 120
121 DQDLISTMLK DYKQFQPDYR CFKFREYYED QVNGTAHCEA ATNKKWFVDV DHLYAYLFVN 180
181 GNHWVALDID LTNKRVNVYD SIPSLTTDTE MAIQCMFVMT MIPAMLSSFI PSKQRRRSYS 240
241 KLEWKRITKI PENLDPGDCA IYSIKYIECL ALGKSFDGLC DENMQSLRTK LAVEMFEEIG 300
301 ENARTLHSKV RRKAFKFPSL MDE
|
| Detection Method: | |
| Confidence: | 45.522879 |
| Match: | 2iycA |
| Description: | No description for 2iycA was found. |
