| Protein: | UBP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1083 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
324.0 | [0..12] | [1082..33] |
|
Region A: Residues: [1-175] |
1 11 21 31 41 51
| | | | | |
1 MRFAATVSEK QSEQSVEVTE EFAVTMTEKR SCVHFDKYVD LDKLLKIIKS YQQIKCGECN 60
61 ERVHVKRGSR WGASNRRDWY SSSDQNCARN AIWLCLECGY YVCGDVGLPT EAQSHVMGHN 120
121 RLTRHRLVIQ CKNPQLRWCF SCQSLLPFDN EENGEKKDLL LEVVKLIRER SPNTY
|
| Detection Method: |  |
| Confidence: | 19.30103 |
| Match: | 2g43A |
| Description: | No description for 2g43A was found. |
|
Region A: Residues: [176-527] |
1 11 21 31 41 51
| | | | | |
1 SASFETEFSC SGSIYGGIEA RDGYAVRGLV NLGNTCFFNS VMQNLLSLDQ LREHFLKEDL 60
61 SVSGPLVSSL KELFAESNSE ASVFRNEINP RDLFFSVCSQ APQFRGYQQH DSHELLRCLL 120
121 DGLSIEESSL RKKLGVSDSN DSSTYQKPTL IDSVFGGEIS STVSCLECGH FSKVYEPFMD 180
181 LSLPVPSMKL PPKKQQILSQ AKEVLKNGAV SKDSEVVSAK PASDHNSTVP LFPSDHKIQS 240
241 RPETSDNETD LVLLSDVSDT APSTEAKGVN QILVGSTETL MHDNDRTGKT VPDKEDVRAT 300
301 QSNEETSASG ISAVIDEAQV CGCPDLEQSS SSANQGADEE LALMVADSQV LY
|
| Detection Method: | |
| Confidence: | 59.522879 |
| Match: | 2ibiA |
| Description: | No description for 2ibiA was found. |
|
Region A: Residues: [528-1083] |
1 11 21 31 41 51
| | | | | |
1 MPYKDHLFYD DYMVAEASSS FVSGDHEPKK DYFDFSSFLD EPEIREGPVF RPLSKSEVYE 60
61 AGFKADCSDD KTVSAGKGEA SSSFISSDHE QNIDYVDFSS FFDEPEISER PFFRPLSKSE 120
121 VSEAGFKADC SDDKTVSAGK GEASSSFVSS DHEQNIDYVD FSSFFDEPEI SERPFFRPLS 180
181 KSEVSEAGFM AVSGNDKTVR AGKGETFSSF MSGDNERNID YVEFTNRIFD DRGTSERPVF 240
241 GPPSKAKVSE AGFVAVSSDS DPAVLDESDS PVSVDRCLAQ FTKHEILSED NAWHCENCSK 300
301 NLKLQRLREK RRTKEGLSNR WVNENGASSA FDECRDSSLN QSCIDLENGY KAAPPITKLP 360
361 NCKEEESAID DGFVGEENTK QAPITSVTET PLLGGETISS QPASDNECEN WEDLAVDSEE 420
421 VIVKRDARKK VLINKAPPVL TIHLKRFSQD ARGRVSKLSG HVDFQEFIDL SKYMDTRCSE 480
481 EDEPVYRLAG LVEHLGAMSR GHYVSYIRGG HKERRDSDTK EPNSSIWYHA SDSQVRPASL 540
541 EEVLRSEAYI LFYERI
|
| Detection Method: | |
| Confidence: | 5.63 |
| Match: | 2f1zA |
| Description: | Crystal structure of HAUSP |
Matching Structure (courtesy of the PDB): |
|
