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View Structure Prediction Details

Protein: gi|3482911, gi|1...
Organism: Arabidopsis thaliana
Length: 188 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3482911, gi|1....

Description E-value Query
Range
Subject
Range
gi|2129667, gi|9... - gi|903894|gb|AAC50023.1| ATPME2 precursor [Arabidopsis thaliana], pir||PC4168 pectinesterase (EC 3.1...
143.0 [0..16] [188..47]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVLVLYIFT PHIEGVEADG PTEALINSIC IENEDYGFCN KIIHEKLKTP TATIKELTSL  60
   61 IIYTTMAHAS DTYIFIDNIL RKWPGPKETS GLKTCHAVYK RETNSFLEIR FLFSKGEYEL 120
  121 MDEAILSTAK ILEECRGDFL IPPYKEPLLE KKRVMRILIT MSAVSGHMVK NEKASLISSV 180
  181 VTAQFFNI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.69897
Match: 1xg2B
Description: Crystal structure of the complex between pectin methylesterase and its inhibitor protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle