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View Structure Prediction Details

Protein: gi|17065134, gi|...
Organism: Arabidopsis thaliana
Length: 353 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17065134, gi|....

Description E-value Query
Range
Subject
Range
gi|21554535 - gi|21554535|gb|AAM63604.1| putative anthocyanidin synthase [Arabidopsis thaliana]
373.0 [0..1] [353..1]

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Predicted Domain #1
Region A:
Residues: [1-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATCWPEPIV SVQSLSQTGV PTVPNRYVKP AHQRPVFNTT QSDAGIEIPV LDMNDVWGKP  60
   61 EGLRLVRSAC EEWGFFQMVN HGVTHSLMER VRGAWREFFE LPLEEKRKYA NSPDTYEGYG 120
  121 SRLGVVKDAK LDWSDYFFLN YLPSSIRNPS KWPSQPPKIR ELIEKYGEEV RKLCERLTET 180
  181 LSESLGLKPN KLMQALGGGD KVGASLRTNF YPKCPQPQLT LGLSSHSDPG GITILLPDEK 240
  241 VAGLQVRRGD GWVTIKSVPN ALIVNIGDQL QILSNGIYKS VEHQVIVNSG MERVSLAFFY 300
  301 NPRSDIPVGP IEELVTANRP ALYKPIRFDE YRSLIRQKGP CGKNQVDSLL LTR

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Detection Method: PSI-BLAST
Confidence: 89.522879
Match: 2brtA
Description: No description for 2brtA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.921320409505 bayes_pls_golite062009
binding 0.588242505102319 bayes_pls_golite062009
nucleic acid binding 0.0678642854814351 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle