| Protein: | gi|7485405, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 773 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7485405, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
336.0 | [0..310] | [773..1] |
|
|
241.0 | [0..330] | [770..326] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MPTYLMVTLM LALAFYIGLN FIATPPPTSL NTLFDEYSRE PGEFAAGMEE GEDRPIDPIS 60
61 DIDITRINDL MFNSNFRAAA
|
| Detection Method: |  |
| Confidence: | 5.721246 |
| Match: | PF08510.3 |
| Description: | No description for PF08510.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.467 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.467 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.365 | N/A | N/A | d.344.1 | Description not found. |
| View | Download | 0.362 | N/A | N/A | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.331 | N/A | N/A | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.312 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.312 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.304 | N/A | N/A | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.304 | N/A | N/A | b.38.1 | Sm-like ribonucleoproteins |
|
Region A: Residues: [81-225] |
1 11 21 31 41 51
| | | | | |
1 DENSIVDLSS QVHQLPCCIR FDGPVEVSHY FKPKSSVRLM WKAVEFVDVE IDGVKTEEAH 60
61 FRGRKLQGAT ISLPSGYSGF VLRQASNLNA NGKRKASMPT EDNQCWEVKA KFNNLTYWNH 120
121 DSLPSKDDTF FRSFHWFSIA EAVTS
|
| Detection Method: | |
| Confidence: | 61.004365 |
| Match: | PF08615.2 |
| Description: | No description for PF08615.2 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [226-288] |
1 11 21 31 41 51
| | | | | |
1 ENKNLEERVK QSALTLHERE IRESEKREKE TRKTPRSSSR LEKAGHLLAD WRKRVILQIW 60
61 IGE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [289-522] |
1 11 21 31 41 51
| | | | | |
1 SFDDKDYFIS GYSRRVEVSK EMESKEIRSS SVFERSMRFN GLFQDKLRVV EKQNQPPKRF 60
61 NQKESNSGFT VIPTKQLCRV YLQKPNLLAS KGIIDALAKP PHRIFGRRYD QQNFKSKLRH 120
121 LHTTSIDPLK HKFGKEENSL RYFTPLGFSS GSRLGDRKKG KDLSFQEEKP KEMKKLCDQK 180
181 KERVVREVKS SLVVSTSRDR VAADVKFRDL SSSGFISKDI NAESVDCSHG SPEC
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [523-632] |
1 11 21 31 41 51
| | | | | |
1 QTNSEDAHQP SPVSVLEPMF YEDNLDDSED ILDDSEDLPY PNFLSLENQL ETLKSESESY 60
61 SDGSGMEVSS DEESALDSAI KESKESEPIG FLDTQESRDS SYIDDILAEV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.250 | a.29.13 | Description not found. |
| View | Download | 0.246 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.235 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.235 | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.235 | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.223 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.218 | a.1.1 | Globin-like |
|
Region A: Residues: [633-773] |
1 11 21 31 41 51
| | | | | |
1 LLGDKNCVPG KRDLVITPKI FEKLEKKYYT ETSWKRSDRK ILFDRVNSSL VEILESFSAT 60
61 PTWKKPVSRR LGTALSTCGL KQELWKVLSR QEKRSKKKSL AKVPVIDIDE WLELEADDES 120
121 VVCELESMIV DELLSEVVSF M
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.480 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.480 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.453 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.441 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.441 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.438 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.431 | N/A | N/A | a.24.29 | Description not found. |
| View | Download | 0.413 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.359 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
