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View Structure Prediction Details

Protein: DGDG1_ARATH
Organism: Arabidopsis thaliana
Length: 808 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for DGDG1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN  60
   61 SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [97-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NEIGIMKKLQ PKISEFRRVY SAPEISRKVM ERWGPARAKL GMDLSAIKKA IVSEMELDER  60
   61 QGVLEMSRLR RRRNSDRVRF TEFFAEAERD GEAYFGDWEP IRSLKSRFKE FEKRSSLEIL 120
  121 SGFKNSEFVE KLKTSFKSIY KETDEAKDVP PLDVPELLAC LVRQSEPFLD QIGVRKDTCD 180
  181 RIVESLCKCK SQQLWRLPSA QASDLIENDN HGVDLDMRIA SVLQSTGHHY DGGFWTDFVK 240
  241 PETPENK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [344-808]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RHVAIVTTAS LPWMTGTAVN PLFRAAYLAK AAKQSVTLVV PWLCESDQEL VYPNNLTFSS  60
   61 PEEQESYIRK WLEERIGFKA DFKISFYPGK FSKERRSIFP AGDTSQFISS KDADIAILEE 120
  121 PEHLNWYYHG KRWTDKFNHV VGIVHTNYLE YIKREKNGAL QAFFVNHVNN WVTRAYCDKV 180
  181 LRLSAATQDL PKSVVCNVHG VNPKFLMIGE KIAEERSRGE QAFSKGAYFL GKMVWAKGYR 240
  241 ELIDLMAKHK SELGSFNLDV YGNGEDAVEV QRAAKKHDLN LNFLKGRDHA DDALHKYKVF 300
  301 INPSISDVLC TATAEALAMG KFVVCADHPS NEFFRSFPNC LTYKTSEDFV SKVQEAMTKE 360
  361 PLPLTPEQMY NLSWEAATQR FMEYSDLDKI LNNGEGGRKM RKSRSVPSFN EVVDGGLAFS 420
  421 HYVLTGNDFL RLCTGATPRT KDYDNQHCKD LNLVPPHVHK PIFGW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.69897
Match: 2jjmA
Description: No description for 2jjmA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle