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View Structure Prediction Details

Protein: gi|12597848, gi|...
Organism: Arabidopsis thaliana
Length: 442 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12597848, gi|....

Description E-value Query
Range
Subject
Range
gi|73972909 - gi|73972909|ref|XP_532135.2| PREDICTED: similar to bystin [Canis familiaris]
653.0 [0..2] [423..148]

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Predicted Domain #1
Region A:
Residues: [1-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKRDRIVN TQPFISDDAS VASSRKRSKV PKTHQKQEKL IEAGMSEKIM KQALAQQKEV  60
   61 ADEENAERNP SSAAFAVAGA ATAGEEQKIL EEEEDDIDDF DGTFENQSQF DKQEEINEDD 120
  121 EKLFESFLNK NA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [133-442]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPQRTLTDII IKKLKDKDAD LAEEERPDPK MDPAITKLYK GVGKFMSEYT VGKLPKAFKL  60
   61 VTSMEHWEDV LYLTEPEKWS PNALYQATRI FASNLKDRQV QRFYNYVLLP RVREDIRKHK 120
  121 KLHFALYQAL KKSLYKPSAF NQGILFPLCK SGTCNLREAV IIGSILEKCS IPMLHSCVAL 180
  181 NRLAEMDYCG TTSYFIKVLL EKKYCMPYRV LDALVAHFMR FVDDIRVMPV IWHQSLLTFV 240
  241 QRYKYEILKE DKEHLQTLLQ RQKHHLVTPE ILRELKDSRN RGEKEDPMSL APVPAKEDRF 300
  301 DIPEVPMEED 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.19
Match: 2ilrA
Description: No description for 2ilrA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle