YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|10178205, gi|...
Organism: Arabidopsis thaliana
Length: 361 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10178205, gi|....

Description E-value Query
Range
Subject
Range
gi|110740324 - gi|110740324|dbj|BAF02057.1| hypothetical protein [Arabidopsis thaliana]
546.0 [0..2] [349..29]

Back

Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIPRLSLLP NNEHNSDNYE DLELEFSSSV LRSLERYLPP EILTANREEK AKFMSDILHK  60
   61 YISREECAKA IRFKNYREWI MSNYQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [86-361]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRFRELYKLD PESLLLPCFR KAVRENTEES FRRIMFEPFP GVYVFKMFQP DFFQKLLVEV  60
   61 ENMRKWLHEA KLMIRKPNNK SKYGVVLDDF GMDIMLKPLV EDFIFPICKV FFPQVCGTMF 120
  121 DTQHGFVIEN CEDRDAELGF HVENSDITLN VCLSKQSEGG EILFTGTRCN KHLKAGPKPE 180
  181 EIFEYCHEPG QAILHLGCHS HGAKAAITSC SRANMILWCI NSLFREMQTY DNEFRDWCGQ 240
  241 CAREKKEKKS QSLASKRKVK KRKKDMILLK FIRCFV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.58
Match: 2hbtA
Description: No description for 2hbtA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle