| Protein: | PME12_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 547 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME12_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
520.0 | [0..7] | [547..24] |
|
Region A: Residues: [1-190] |
1 11 21 31 41 51
| | | | | |
1 MALSSFNLSS LLFLLFFTPS VFSYSYQPSL NPHETSATSF CKNTPYPDAC FTSLKLSISI 60
61 NISPNILSFL LQTLQTALSE AGKLTDLLSG AGVSNNLVEG QRGSLQDCKD LHHITSSFLK 120
121 RSISKIQDGV NDSRKLADAR AYLSAALTNK ITCLEGLESA SGPLKPKLVT SFTTTYKHIS 180
181 NSLSALPKQR
|
| Detection Method: |  |
| Confidence: | 20.0 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [191-547] |
1 11 21 31 41 51
| | | | | |
1 RTTNPKTGGN TKNRRLLGLF PDWVYKKDHR FLEDSSDGYD EYDPSESLVV AADGTGNFST 60
61 INEAISFAPN MSNDRVLIYV KEGVYDENID IPIYKTNIVL IGDGSDVTFI TGNRSVGDGW 120
121 TTFRSATLAV SGEGFLARDI MITNTAGPEK HQAVALRVNA DFVALYRCVI DGYQDTLYTH 180
181 SFRQFYRECD IYGTIDYIFG NAAVVFQGCN IVSKLPMPGQ FTVITAQSRD TQDEDTGISM 240
241 QNCSILASED LFNSSNKVKS YLGRPWREFS RTVVMESYID EFIDGSGWSK WNGGEALDTL 300
301 YYGEYNNNGP GSETVKRVNW PGFHIMGYED AFNFTATEFI TGDGWLGSTS FPYDNGI
|
| Detection Method: | |
| Confidence: | 101.0 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142826098671881 | bayes_pls_golite062009 |
