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View Structure Prediction Details

Protein: TYRA2_ARATH
Organism: Arabidopsis thaliana
Length: 358 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TYRA2_ARATH.

Description E-value Query
Range
Subject
Range
gi|160860401, gi... - gi|160874879|ref|YP_001554195.1| 6-phosphogluconate dehydrogenase NAD-binding [Shewanella baltica OS...
gi|151364864, gi... - gi|153000246|ref|YP_001365927.1| 6-phosphogluconate dehydrogenase NAD-binding [Shewanella baltica OS...
203.0 [0..60] [340..3]

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Predicted Domain #1
Region A:
Residues: [1-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLHFSPAKP LISPPNLRRN SPTFLISPPR SLRIRAIDAA QIFDYETQLK SEYRKSSALK  60
   61 IAVLGFGNFG QFLSKTLIRH GHDLITHSRS DYSDAANSIG ARFFDNPHDL CEQHPDVVLL 120
  121 CTSILSTESV LRSFPFQRLR RSTLFVDVLS VKEFPKALFI KYLPKEFDIL CTHPMFGPES 180
  181 GKHSWSGLPF VYDKVRIGDA ASRQERCEKF LRIFENEGCK MVEMSCEKHD YYAAGSQFVT 240
  241 HTMGRVLEKY GVESSPINTK GYETLLDLVE NTSSDSFELF YGLFMYNPNA LEQLERLDMA 300
  301 FESVKKELFG RLHQQYRKQM FGGEVQSPKK TEQKLLNDGG VVPMNDISSS SSSSSSSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.221849
Match: 2pv7A
Description: No description for 2pv7A was found.

Predicted functions:

Term Confidence Notes
catalytic activity 2.16785883389468 bayes_pls_golite062009
oxidoreductase activity 1.95477050413 bayes_pls_golite062009
prephenate dehydrogenase activity 1.03016160419952 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.771153340292 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.66554302844944 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle