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View Structure Prediction Details

Protein: BUBR1_ARATH
Organism: Arabidopsis thaliana
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BUBR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593781 - gi|21593781|gb|AAM65748.1| unknown [Arabidopsis thaliana]
415.0 [0..1] [395..1]
gi|92870356 - gi|92870356|gb|ABE79666.1| Cellular retinaldehyde-binding/triple function, C-terminal [Medicago trun...
331.0 [0..3] [395..2]
gi|109468655 - gi|109468655|ref|XP_342495.3| PREDICTED: similar to budding uninhibited by benzimidazoles 1 homolog,...
329.0 [0..14] [381..166]
gi|74228888 - gi|74228888|dbj|BAE21921.1| unnamed protein product [Mus musculus]
321.0 [0..14] [381..2]
gi|2981235 - gi|2981235|gb|AAC06260.1| mitotic checkpoint kinase Mad3L [Homo sapiens]
319.0 [0..22] [381..17]

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Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAETKVQVS DPEAEFLNSK QETGYEWELF KENVRPLKRG RNVGILNHAL KSHSDHQLRK  60
   61 NLIEKRRNLI EAIDEYE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.844 a.50.1 Anaphylotoxins (complement system)

Predicted Domain #2
Region A:
Residues: [78-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDDPLSPWIE CIKWVQEAFP PGGECSGLLV IYEQCVRKFW HSERYKDDLR YLKVWLEYAE  60
   61 HCADAEVIYK FLEVNEIGKT HAVYYIAYAL HIEFKNKVKT ANEIFNLGIS RDAKPVEKLN 120
  121 DAYKKFMVRT MRRSNTADEE PKENNDLPSR SFGTLLSR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.221849
Match: 2ondA
Description: No description for 2ondA was found.

Predicted Domain #3
Region A:
Residues: [236-306]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDNNARRQAL GSSNPQAKKL KPNQSSKTPF AIYADAVSDT TSGNQPESDK SRPEFGSWLM  60
   61 LGGRAERNKE N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [307-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSLPRKWASF KVPQKPIVRT VAAASASTFE VFVDEEECTE EEEEKKKNDE TISSSSNVLP  60
   61 LNGGREIKKE TELLRQNPLR HFPPNSFLR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle