| Protein: | PME20_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 560 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME20_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
515.0 | [0..3] | [558..14] |
|
Region A: Residues: [1-194] |
1 11 21 31 41 51
| | | | | |
1 MSQKLMFLFT LACLSSLPSP FISAQIPAIG NATSPSNICR FAPDPSYCRS VLPNQPGDIY 60
61 SYGRLSLRRS LSRARRFISM IDAELDRKGK VAAKSTVGAL EDCKFLASLT MDYLLSSSQT 120
121 ADSTKTLSLS RAEDVHTFLS AAITNEQTCL EGLKSTASEN GLSGDLFNDT KLYGVSLALF 180
181 SKGWVPRRQR SRPI
|
| Detection Method: |  |
| Confidence: | 19.0 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [195-560] |
1 11 21 31 41 51
| | | | | |
1 WQPQARFKKF FGFRNGKLPL KMTERARAVY NTVTRRKLLQ SDADAVQVSD IVTVIQNGTG 60
61 NFTTINAAIA AAPNKTDGSN GYFLIYVTAG LYEEYVEVPK NKRYVMMIGD GINQTVITGN 120
121 RSVVDGWTTF NSATFILSGP NFIGVNITIR NTAGPTKGQA VALRSGGDLS VFYSCSFEAY 180
181 QDTLYTHSLR QFYRECDVYG TVDFIFGNAA VVLQNCNLYP RQPRKGQSNE VTAQGRTDPN 240
241 QNTGTAIHGC TIRPADDLAT SNYTVKTYLG RPWKEYSRTV VMQTYIDGFL EPSGWNAWSG 300
301 DFALSTLYYA EYNNTGPGSD TTNRVTWPGY HVINATDASN FTVTNFLVGE GWIGQTGVPF 360
361 VGGLIA
|
| Detection Method: | |
| Confidence: | 100.0 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142826098671881 | bayes_pls_golite062009 |
