| Protein: | RK18_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 170 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RK18_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
156.0 | [0..29] | [169..5] |
|
Region A: Residues: [1-170] |
1 11 21 31 41 51
| | | | | |
1 MTSVSGCGSV SLITNRSAFL GNGLQHRAVF LKPWSSSSLQ SRSMVVEAKT KTSSEDRIAR 60
61 HSRIRKKVNG TTERPRLCVF RSNKHLYVQV IDDTKMHTLA SASTKQKPIS EEFDYTSGPT 120
121 IEVAKKVGEV IAKSCLEKGI TKVAFDRGGY PYHGRIEALA AAAREHGLQF
|
| Detection Method: |  |
| Confidence: | 37.69897 |
| Match: | 1ovyA |
| Description: | Solution Structure of Ribosomal Protein L18 from Bacillus stearothermophilus |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 9.83351366956976 | bayes_pls_golite062009 |
| structural molecule activity | 9.25292687983044 | bayes_pls_golite062009 |
| RNA binding | 1.52264031918826 | bayes_pls_golite062009 |
| binding | 1.00308223323532 | bayes_pls_golite062009 |
| nucleic acid binding | 0.903597805385443 | bayes_pls_golite062009 |
| protein binding | 0.452073733364249 | bayes_pls_golite062009 |
| rRNA binding | 0.357032493028 | bayes_pls_golite062009 |
| catalytic activity | 0.249767694451989 | bayes_pls_golite062009 |
| translation regulator activity | 0.17520676474539 | bayes_pls_golite062009 |
| 5S rRNA binding | 0.0277071268037008 | bayes_pls_golite062009 |
