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View Structure Prediction Details

Protein: UVB31_ARATH
Organism: Arabidopsis thaliana
Length: 421 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UVB31_ARATH.

Description E-value Query
Range
Subject
Range
gi|17064820, gi|... - gi|20259856|gb|AAM13275.1| unknown protein [Arabidopsis thaliana], gi|17064820|gb|AAL32564.1| Unknow...
624.0 [0..1] [421..1]
gi|125587716, gi... - gi|50918341|ref|XP_469567.1| unknown protein [Oryza sativa (japonica cultivar-group)], gi|28301943|g...
gi|125545521 - gi|125545521|gb|EAY91660.1| hypothetical protein OsI_13299 [Oryza sativa Indica Group]
518.0 [0..39] [421..28]

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Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDALTSSLVR SPIVPSRTSD NGSGSMFLTA SGPGFTRSGS SRLQLRLRQN ASARSSRSLQ  60
   61 SLTTTAKTRR SFVVRASSAS NDASSGSSPK PIAPLQLQSP AGQFLSQILV SHPHLVPAAV 120
  121 EQQLEQLQTD RDSQGQNKDS ASVPGTDIVL YRRIAELKEN ERRRTLEEIL YALVVQKFME 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [181-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANVSLVPSVS PSSDPSGRVD TWPTKVEKLE RLHSPEMYEM IHNHLALILG SRMGDLNSVA  60
   61 QISKLRVGQV YAASVMYGYF LKRVDQRFQL EKTMKILPGG SDESKTSVEQ AEGTATYQAA 120
  121 VSSHPEVGAF AGGVSAKGFG SEI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.638 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.499 N/A N/A a.24.18 Description not found.
View Download 0.483 N/A N/A a.25.1 Ferritin-like
View Download 0.341 N/A N/A a.24.19 Description not found.
View Download 0.334 N/A N/A a.1.1 Globin-like
View Download 0.330 N/A N/A a.118.8 TPR-like
View Download 0.309 N/A N/A a.118.1 ARM repeat
View Download 0.287 N/A N/A a.1.1 Globin-like

Predicted Domain #3
Region A:
Residues: [324-421]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPSRLRSYVM SFDAETLQRY ATIRSREAVG IIEKHTEALF GKPEIVITPE GTVDSSKDEQ  60
   61 IKISFGGMKR LVLEAVTFGS FLWDVESHVD ARYHFVLN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.560 N/A N/A a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.484 N/A N/A a.118.19 Description not found.
View Download 0.411 N/A N/A a.118.1 ARM repeat
View Download 0.407 N/A N/A a.35.1 lambda repressor-like DNA-binding domains
View Download 0.362 N/A N/A d.352.1 Description not found.
View Download 0.326 N/A N/A a.35.1 lambda repressor-like DNA-binding domains
View Download 0.279 N/A N/A a.156.1 S13-like H2TH domain
View Download 0.238 N/A N/A a.28.2 Colicin E immunity proteins
View Download 0.231 N/A N/A a.163.1 Crustacean CHH/MIH/GIH neurohormone


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle