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View Structure Prediction Details

Protein: TATC_ARATH
Organism: Arabidopsis thaliana
Length: 340 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TATC_ARATH.

Description E-value Query
Range
Subject
Range

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Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTSTSSAL IHHFRLTTRN LGSPTKQRCP YAVTFCNSWR EAGLRYSVTQ RRSKGFGPVS  60
   61 ALNDDDSPTE TTPGVGSAVE DRPPDSSEDR SSSVYEFLYP R

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [102-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KEELPDDKEM TIFDHLEELR ERIFVSVLAV GAAILGCFAF SKDLIVFLEA PVKT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [156-340]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGVRFLQLAP GEFFFTTLKV SGYCGLLLGS PVILYEIIAF VLPGLTRAER RFLGPIVFGS  60
   61 SLLFYAGLAF SYWVLTPAAL NFFVNYAEGV VESLWSIDQY FEFVLVLMFS TGLSFQVPVI 120
  121 QLLLGQVGVV SGDQMLSIWR YVVVGAVVAA AVVTPSTDPV TQMLLATPLL GLYLGGAWMV 180
  181 KLTGR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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