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View Structure Prediction Details

Protein: gi|11994705, gi|...
Organism: Arabidopsis thaliana
Length: 273 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11994705, gi|....

Description E-value Query
Range
Subject
Range
tr|Q87XT7|Q87XT7... - Hydrolase, alpha/beta fold family OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PSPTO_4089 P...
gi|213971418, gi... - gi|213971418|ref|ZP_03399532.1| hydrolase, alpha/beta fold family [Pseudomonas syringae pv. tomato T...
gi|28871231, gi|... - gi|28871231|ref|NP_793850.1| alpha/beta fold family hydrolase [Pseudomonas syringae pv. tomato str. ...
182.0 [0..6] [271..3]

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Predicted Domain #1
Region A:
Residues: [1-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVNQKISGL ASAMNAKIIG SGERSMVLAH GFGGDQSVWD KIIPVLSQSF KVLVFDWLFS  60
   61 GAIKDQTLYD PSKYNSLDVF SDDLIALMEE LKFGPVVFVG HSMSGVIGCA ASIKRPDLFT 120
  121 NLLLIAASPR YINSEDYKGG FESKDIDTII TSIGSNYEAW AVDFSSFVVD SRDSLSVQRF 180
  181 EKSLKKMKPE TALALAKIVF GSDEREILGQ VSVPCHVIQP GNDVVVPVSV AYFMQEKIKG 240
  241 KSTVEIIEDA IGHFPQMTSH LELLGVMRRL LEF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.522879
Match: 1womA
Description: Crystal structure of RsbQ
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle