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View Structure Prediction Details

Protein: gi|7438018, gi|3...
Organism: Arabidopsis thaliana
Length: 597 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7438018, gi|3....

Description E-value Query
Range
Subject
Range
gi|109477144, gi... - gi|109477144|ref|XP_001053648.1| PREDICTED: similar to CTP synthase (UTP--ammonia ligase) (CTP synth...
733.0 [0..1] [582..256]

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Predicted Domain #1
Region A:
Residues: [1-597]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYVLVTGGV VSGLGKGITA SSVGVLLQSC GLRVTCIKID PYLNYDAGTI SPYEHGEVFV  60
   61 LDDGSEVDLD LGNYERFLDT TLTRDNNITY GKIQRYVMEK ERKGDYLGET VQIVPHVTDT 120
  121 IREWVERVAM IPVDGKEGPP DVCIIELGGT IGDNESRPFA DALSQLSYSV GRENFCLIHV 180
  181 TLVPVLSVVG EQKTKPTQHS IKDLRGFGLT PNIIACRSTK ALEENVKAKL SRFCYVPIQN 240
  241 IFSLCDVPNI WHIPLLLKEQ KAHEAISKVL NLSGIAKEPS LEKWASMVEI SDGLNVPVRI 300
  301 AIVGKYTDLS DAYLSVLKAL LHASVAFHKK LEVDMVPSCD LEKTKKQEDS RAYEAAWKLL 360
  361 KDANGVLLPG GFGDRGVEGM ILAAKYAREN NIPFLGICLG MQIAVIEFAR SLLCLPDANS 420
  421 TEFEPETKHP CIIFMPEGSI THMGGTMRLG SRRAYFHDKE SKSARLYGNK EFVDERHRHR 480
  481 YEVNPDMVAS LEQAGLSFAA KDETGERMEI VELPSHPFFI GAQFHPEYKS RPRKVSPLFL 540
  541 GLIAASCGEL DAVLNPVSIH QHNQTMFLEK KQHIGWSKKC FGDKNQQEEI SETSFPM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1s1mA
Description: Crystal Structure of E. Coli CTP Synthetase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle