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View Structure Prediction Details

Protein: TRL11_ARATH
Organism: Arabidopsis thaliana
Length: 275 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRL11_ARATH.

Description E-value Query
Range
Subject
Range
gi|50745403 - gi|50745403|ref|XP_420095.1| PREDICTED: similar to protein disulfide-isomerase (EC 5.3.4.1) precurso...
170.0 [0..1] [207..570]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEVISKTSL FLGACGNHHR VDDFSFSPVS FGGFGLKKSF SCLKLKSQKP LRSVFYGKQI  60
   61 VFGDSQDESF RRSSAITAQT TLRIGTAQKW WEKG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.69897
Match: 2h8lA
Description: No description for 2h8lA was found.

Predicted Domain #2
Region A:
Residues: [95-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKDNMREISS AQELVDSLTN AGDKLVVVDF FSPGCGGCKA LHPKICQFAE MNPDVQFLQV  60
   61 NYEEHKSMCY SLGVHVLPFF RFYRGSQGRV CSFSCTNATI KKFRDALAKH GPDRCSLGPT 120
  121 KGLEEKELVA LAANKELNFT YTPKPVPVEK EAATPDSNPS LPVPLPSMSS NDEKTLVSAG 180
  181 R

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.045757
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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