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View Structure Prediction Details

Protein: PUMP6_ARATH
Organism: Arabidopsis thaliana
Length: 337 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUMP6_ARATH.

Description E-value Query
Range
Subject
Range
gi|159123244 - gi|159123244|gb|EDP48364.1| mitochondrial carrier protein, putative [Aspergillus fumigatus A1163]
gi|66846617, gi|... - gi|70987004|ref|XP_748987.1| mitochondrial carrier protein [Aspergillus fumigatus Af293], gi|6684661...
284.0 [0..40] [333..335]

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Predicted Domain #1
Region A:
Residues: [1-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFKPFLEGG IAAIIAGALT HPLDLIKVRM QLQGEHSFSL DQNPNPNLSL DHNLPVKPYR  60
   61 PVFALDSLIG SISLLPLHIH APSSSTRSVM TPFAVGAHIV KTEGPAALFS GVSATILRQM 120
  121 LYSATRMGIY DFLKRRWTDQ LTGNFPLVTK ITAGLIAGAV GSVVGNPADV AMVRMQADGS 180
  181 LPLNRRRNYK SVVDAIDRIA RQEGVSSLWR GSWLTVNRAM IVTASQLATY DHVKEILVAG 240
  241 GRGTPGGIGT HVAASFAAGI VAAVASNPID VVKTRMMNAD KEIYGGPLDC AVKMVAEEGP 300
  301 MALYKGLVPT ATRQGPFTMI LFLTLEQVRG LLKDVKF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.522879
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle