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View Structure Prediction Details

Protein: CDPKS_ARATH
Organism: Arabidopsis thaliana
Length: 523 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDPKS_ARATH.

Description E-value Query
Range
Subject
Range
gi|21553971 - gi|21553971|gb|AAM63052.1| calcium-dependent protein kinase [Arabidopsis thaliana]
432.0 [0..1] [523..1]

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Predicted Domain #1
Region A:
Residues: [1-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVCFSAIRV TGASSSRRSS QTKSKAAPTP IDTKASTKRR TGSIPCGKRT DFGYSKDFHD  60
   61 HYTIGKLLGH GQFGYTYVAI HRPNGDRVAV KRLDKSKMVL PIAVEDVKRE VQILIALSGH 120
  121 ENVVQFHNAF EDDDYVYIVM ELCEGGELLD RILSKKGNRY SEKDAAVVVR QMLKVAGECH 180
  181 LHGLVHRDMK PENFLFKSAQ LDSPLKATDF GLSDFIKPGK RFHDIVGSAY YVAPEVLKRR 240
  241 SGPESDVWSI GVITYILLCG RRPFWDRTED GIFKEVLRNK PDFSRKPWAT ISDSAKDFVK 300
  301 KLLVKDPRAR LTAAQALSHA WVREGGNATD IPVDISVLNN LRQFVR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.221849
Match: 2bdwA
Description: Crystal Structure of the Auto-Inhibited Kinase Domain of Calcium/Calmodulin Activated Kinase II
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [347-523]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YSRLKQFALR ALASTLDEAE ISDLRDQFDA IDVDKNGVIS LEEMRQALAK DLPWKLKDSR  60
   61 VAEILEAIDS NTDGLVDFTE FVAAALHVHQ LEEHDSEKWQ LRSRAAFEKF DLDKDGYITP 120
  121 EELRMHTGLR GSIDPLLDEA DIDRDGKISL HEFRRLLRTA SISSQRAPSP AGHRNLR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.39794
Match: 2aaoA
Description: Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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