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View Structure Prediction Details

Protein: CTL2_ARATH
Organism: Arabidopsis thaliana
Length: 333 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CTL2_ARATH.

Description E-value Query
Range
Subject
Range
gi|92868446 - gi|92868446|gb|ABE78451.1| Glycoside hydrolase, family 19; Chitin-binding, type 1 [Medicago truncatu...
382.0 [0..10] [320..1]

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Predicted Domain #1
Region A:
Residues: [1-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSKPLFSLL LLTVALVVFQ TGTLVNAEDS EPSSSTRKPL VKIVKGKKLC DKGWECKGWS  60
   61 EYCCNHTISD FFETYQFENL FSKRNSPVAH AVGFWDYRSF ITAAAEYQPL GFGTAGEKLQ 120
  121 GMKEVAAFLG HVGSKTSCGY GVATGGPLAW GLCYNKEMSP DQLYCDDYYK LTYPCTPGVS 180
  181 YHGRGALPVY WNYNYGQTGE ALKVDLLSHP EYLENNATLA FQAAIWRWMT PPKKHLPSAH 240
  241 DVFVGKWKPT KNDTAAKRTP GFGATINVLY GDQICNSGFD NDEMNNIVSH YLYYLDLIGV 300
  301 GREEAGPHEK LSCADQEPFS SSSSAPPSSG SSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 88.522879
Match: 2dkvA
Description: No description for 2dkvA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle