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View Structure Prediction Details

Protein: SBT46_ARATH
Organism: Arabidopsis thaliana
Length: 736 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SBT46_ARATH.

Description E-value Query
Range
Subject
Range
gi|5541675, gi|7... - pir||T12964 subtilisin homolog T6H20.130 - Arabidopsis thaliana, gi|5541675|emb|CAB51181.1| subtilis...
494.0 [0..1] [736..1]

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Predicted Domain #1
Region A:
Residues: [1-113]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAVSYCLL SCIFALLVVS FASAGKDDQD KQVYIVYMGA LPSRVDYMPM SHHTSILQDV  60
   61 TGESSIQDRL VRNYKRSFNG FAARLTESER EILASMDEVV SVFPSKNLNL QTT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.69897
Match: 1r6vA
Description: Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [114-736]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSWNFMGLKE GKRTKRNPLI ESDTIIGVID SGIYPESDSF SGKGFGPPPK KWKGVCKGGT  60
   61 NFTCNNKLIG ARYYTPKLEG FPESARDNTG HGSHTASIAA GNAVKHVSFY GLGNGTVRGG 120
  121 VPAARIAVYK VCDPGVIRCT SDGILAAFDD AIADKVDIIT VSLGADAVGT FEEDTLAIGA 180
  181 FHAMAKGILT VNGAGNNGPE RRTIVSMAPW LFTVAASNMN RAFITKVVLG NGKTIVGRSV 240
  241 NSFDLNGKKY PLVYGKSASS RCDASSAGFC SPGCLDSKRV KGKIVLCDTQ RNPGEAQAMG 300
  301 AVASIVRNPY EDAASVFSFP VSVLSEDDYN IVLSYVNSTK NPKAAVLKSE TIFNQKAPVV 360
  361 ASYSSRGPNP LIHDILKPDI TAPGSEILAA YSPYVPPSES DTRHVKYTVI SGTSMSCPHV 420
  421 AGVAAYIKTF HPLWSPSMIQ SAIMTTAWPM NASTSPSNEL AEFAYGAGHV DPIAAIHPGL 480
  481 VYEANKSDHI TFLCGFNYTG KKLRLISGDS SSCTKEQTKS LTRNLNYPSM SAQVSGTKPF 540
  541 KVTFRRTVTN VGRPNATYKA KVVGSKLKVK VVPAVLSLKS LYEKKSFTVT VSGAGPKAEN 600
  601 LVSAQLIWSD GVHFVRSPIV VYA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.69897
Match: 1xf1A
Description: Structure of C5a peptidase- a key virulence factor from Streptococcus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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