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View Structure Prediction Details

Protein: AFB2_ARATH
Organism: Arabidopsis thaliana
Length: 575 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AFB2_ARATH.

Description E-value Query
Range
Subject
Range
gi|55770563 - ref|XP_550272.1| putative receptor-like protein kinase INRPK1 [Oryza sativa (japonica cultivar-group...
gi|115434762, gi... - gi|55770563|ref|XP_550272.1| putative receptor-like protein kinase INRPK1 [Oryza sativa (japonica cu...
322.0 [0..18] [575..84]

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Predicted Domain #1
Region A:
Residues: [1-575]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYFPDEVIE HVFDFVTSHK DRNAISLVCK SWYKIERYSR QKVFIGNCYA INPERLLRRF  60
   61 PCLKSLTLKG KPHFADFNLV PHEWGGFVLP WIEALARSRV GLEELRLKRM VVTDESLELL 120
  121 SRSFVNFKSL VLVSCEGFTT DGLASIAANC RHLRDLDLQE NEIDDHRGQW LSCFPDTCTT 180
  181 LVTLNFACLE GETNLVALER LVARSPNLKS LKLNRAVPLD ALARLMACAP QIVDLGVGSY 240
  241 ENDPDSESYL KLMAVIKKCT SLRSLSGFLE AAPHCLSAFH PICHNLTSLN LSYAAEIHGS 300
  301 HLIKLIQHCK KLQRLWILDS IGDKGLEVVA STCKELQELR VFPSDLLGGG NTAVTEEGLV 360
  361 AISAGCPKLH SILYFCQQMT NAALVTVAKN CPNFIRFRLC ILEPNKPDHV TSQPLDEGFG 420
  421 AIVKACKSLR RLSLSGLLTD QVFLYIGMYA NQLEMLSIAF AGDTDKGMLY VLNGCKKMKK 480
  481 LEIRDSPFGD TALLADVSKY ETMRSLWMSS CEVTLSGCKR LAEKAPWLNV EIINENDNNR 540
  541 MEENGHEGRQ KVDKLYLYRT VVGTRMDAPP FVWIL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.0
Match: 2p1mB
Description: No description for 2p1mB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle