| Protein: | gi|15232654, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 600 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15232654, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
414.0 | [0..3] | [594..5] |
|
Region A: Residues: [1-263] |
1 11 21 31 41 51
| | | | | |
1 MVWCNHCVKN VPGIRPYDGA LACNLCGRIL ENFHFSTEVT FVKNAAGQSQ ASGNIVRSVQ 60
61 SGITSSRERR FRIARDELMN LKDALGIGDE RDDVIVIAAK FFEMAVEQNF TKGRRTELVQ 120
121 ASCLYLTCRE LNIALLLIDF SSYLRVSVYE LGSVYLQLCE MLYLVENRNY EKLVDPSIFM 180
181 DRFSNSLLKG KNNKDVVATA RDIIASMKRD WIQTGRKPSG ICGAALYTAA LSHGIKCSKT 240
241 DIVNIVHICE ATLTKRLIEF GDT
|
| Detection Method: |  |
| Confidence: | 54.09691 |
| Match: | 1c9bA |
| Description: | Transcription factor IIB (TFIIB), core domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [264-600] |
1 11 21 31 41 51
| | | | | |
1 DSGNLNVNEL RERESHKRSF TMKPTSNKEA VLCMHQDSKP FGYGLCEDCY KDFINVSGGL 60
61 VGGSNPPAFQ RAEKERMEKA AREENEGGIS SLNHDEQLYH LRIYLGCVAE KGEKDKDGAE 120
121 EHADTSDESD NFSDISDDEV NGYINNEEET HYKTITWTEM NKDYLEEQAA KEAALKAASE 180
181 ALKASNSNCP EDARKAFEAA KADAAKSRKE KQQKKAEEAK NAAPPATAVE AVRRTLDKKR 240
241 LSSVINYDVL ESLFDTSAPE KSPKRSKTET DIEKKKEENK EMKSNEHENG ENEDEDEEDE 300
301 EEGNVESYDM KTDFQNGEKF YEEDEEEEED GNDFGLY
|
| Detection Method: | |
| Confidence: | 3.045757 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
