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View Structure Prediction Details

Protein: MP701_ARATH
Organism: Arabidopsis thaliana
Length: 622 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MP701_ARATH.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
276.0 [0..1] [622..1884]

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Predicted Domain #1
Region A:
Residues: [1-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDVSADGGF LSAEQATTPV AIPTPYPSLT VSASYKEKSS GRRRPVRPSF DAAADNEFIT  60
   61 LLHGSDPVKV ELNRLENEVR DKDRELSEAN AEIKALRLSE RQREKACEEL TDELAKLDGK 120
  121 LKLTESLLQS KNLEIKKINE EKKASMAAQF AAEATLRRVH AAQKDDDMPP IEAILAPLEA 180
  181 ELKLARSEIG KLQEDNRALD RLTKSKEAAL LDAERTVETA LAKAALVDDL QNKNQELMKQ 240
  241 IEICQEENKI LDRMHRQKVA EVEKLTQT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [269-507]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VRELEEAVLA GGAAANAVRD YQRKFQEMNE ERKTLDRELA RAKVTANRVA TVVANEWKDG  60
   61 NDKVMPVKQW LEERRFLQGE MQQLRDKLAI SDRAAKSEAQ LKDKFQLRLR VLEETLRGTS 120
  121 SISIRNTPEG RSMSNGPSRR QSIGGSDNLQ KFASNGFLSK KTPMRNSFTS NSTSVLKNAK 180
  181 GTSKSFDGGT RSLDRGKALL KGPGNYSFNK ACDETKESES PNTWKEDSEE KPPSELPAP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.0
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #3
Region A:
Residues: [508-622]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATEDNVPGVL YDLLQKEVVA LRKSSHEKDQ SLKDKDDAIE MLAKKVETLT KAMEVEAKKM  60
   61 RREVAAMEKE VAAMRVDKDQ DNRAKRSSNT KPSSNTAQIL AARAAGRSGL TRSTQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.2
Match: 1m1jC
Description: Fibrinogen C-terminal domains; Fibrinogen gamma chain
Matching Structure (courtesy of the PDB):

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