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View Structure Prediction Details

Protein: gi|48310461, gi|...
Organism: Arabidopsis thaliana
Length: 278 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|48310461, gi|....

Description E-value Query
Range
Subject
Range
gi|76648308 - gi|76648308|ref|XP_618630.2| PREDICTED: similar to small CTD phosphatase 3 isoform 2 isoform 1 [Bos ...
277.0 [0..37] [275..20]

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Predicted Domain #1
Region A:
Residues: [1-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACHGFLGKP TPKSFGRHHK HARKNRNHQS RCLAAAVAAA GSIFTSLNMS IFTFHNRLLR  60
   61 CVSRFLRLAT TSSATPTRRP TMKQGYKKLH KREPLIRRND KKRTIFLDLD ETLVHSTMEP 120
  121 PIRVNVDFMV RIKIEGAVIP MFVVKRPGVT EFLERISKNY RVAIFTAGLP EYASQVLDKL 180
  181 DKNRVISQRL YRDSCTEVNG RYAKDLSLVA KNDLGSVLLV DDNPFSYSLQ PDNGVPIKPF 240
  241 MDDMEDQELM KLAEFFDGCY QYEDLRDAAA ELLSSKLI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.154902
Match: 2hhlA
Description: No description for 2hhlA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle