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View Structure Prediction Details

Protein: PHOT2_ARATH
Organism: Arabidopsis thaliana
Length: 915 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for PHOT2_ARATH.

Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERPRAPPSP LNDAESLSER RSLEIFNPSS GKETHGSTSS SSKPPLDGNN KGSSSKWMEF  60
   61 QDSAKITERT AEWGLSAVKP DSGDDGISFK 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [91-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSSEVERSKN MSRRSSEEST SSESGAFPRV SQELKTALST LQQTFVVSDA TQPHCPIVYA  60
   61 SSGFFTMTGY SSKEIVGRNC RFLQGPDTDK NEVAKIRDCV KNGKSYCGRL LNYKKDGTPF 120
  121 WNLLTVTPIK DDQGNTIKFI GMQVEVSKYT EGVNDKALRP NGLS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.154902
Match: 2z6dA
Description: No description for 2z6dA was found.

Predicted Domain #3
Region A:
Residues: [255-538]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSLIRYDARQ KEKALDSITE VVQTIRHRKS QVQESVSNDT MVKPDSSTTP TPGRQTRQSD  60
   61 EASKSFRTPG RVSTPTGSKL KSSNNRHEDL LRMEPEELML STEVIGQRDS WDLSDRERDI 120
  121 RQGIDLATTL ERIEKNFVIS DPRLPDNPII FASDSFLELT EYSREEILGR NCRFLQGPET 180
  181 DQATVQKIRD AIRDQREITV QLINYTKSGK KFWNLFHLQP MRDQKGELQY FIGVQLDGSD 240
  241 HVEPLQNRLS ERTEMQSSKL VKATATNVDE AVRELPDANT RPED

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [539-915]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LWAAHSKPVY PLPHNKESTS WKAIKKIQAS GETVGLHHFK PIKPLGSGDT GSVHLVELKG  60
   61 TGELYAMKAM EKTMMLNRNK AHRACIEREI ISLLDHPFLP TLYASFQTST HVCLITDFCP 120
  121 GGELFALLDR QPMKILTEDS ARFYAAEVVI GLEYLHCLGI VYRDLKPENI LLKKDGHIVL 180
  181 ADFDLSFMTT CTPQLIIPAA PSKRRRSKSQ PLPTFVAEPS TQSNSFVGTE EYIAPEIITG 240
  241 AGHTSAIDWW ALGILLYEML YGRTPFRGKN RQKTFANILH KDLTFPSSIP VSLVGRQLIN 300
  301 TLLNRDPSSR LGSKGGANEI KQHAFFRGIN WPLIRGMSPP PLDAPLSIIE KDPNAKDIKW 360
  361 EDDGVLVNST DLDIDLF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 88.154902
Match: 2r5tA
Description: No description for 2r5tA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle