| Protein: | PPR79_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 471 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPR79_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
422.0 | [0..5] | [470..117] |
|
|
408.0 | [0..3] | [469..181] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MSAVKSVSSF RLASLLRREN DPSAAMKLFR NPDPESTNPK RPFRYSLLCY DIIITKLGGS 60
61 KMFDELDQVL LHLKTDT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [78-471] |
1 11 21 31 41 51
| | | | | |
1 RIVPTEIIFC NVINFFGRGK LPSRALHMFD EMPQYRCQRT VKSLNSLLSA LLKCGELEKM 60
61 KERLSSIDEF GKPDACTYNI LIHGCSQSGC FDDALKLFDE MVKKKVKPTG VTFGTLIHGL 120
121 CKDSRVKEAL KMKHDMLKVY GVRPTVHIYA SLIKALCQIG ELSFAFKLKD EAYEGKIKVD 180
181 AAIYSTLISS LIKAGRSNEV SMILEEMSEK GCKPDTVTYN VLINGFCVEN DSESANRVLD 240
241 EMVEKGLKPD VISYNMILGV FFRIKKWEEA TYLFEDMPRR GCSPDTLSYR IVFDGLCEGL 300
301 QFEEAAVILD EMLFKGYKPR RDRLEGFLQK LCESGKLEIL SKVISSLHRG IAGDADVWSV 360
361 MIPTMCKEPV ISDSIDLLLN TVKEDGPLSA MPQC
|
| Detection Method: | |
| Confidence: | 41.39794 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
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